Content Comparison

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• O2 Portal - View and edit your O2 files from within the O2Portal web interface (10TiB limit on transfers)

• Globus - helps people inside and outside Harvard University access and transfer data to and from the HMS O2 Cluster storage

• FileZilla - a Mac/Linux/Windows standalone sftp tool, with available Firefox browser plugin

• winscp - a Windows scp/sftp app

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• scp, sftp, rsync - these are automatically installed on Mac and Linux

• pscp, psftp - Windows-only. These can be installed with the PuTTY ssh program.

• ftp - available on O2 for downloading from external sites which only accept FTP logins. But, O2 does not accept incoming FTP logins.

• aspera - a data transport and streaming technology, now owned by IBM.

• awscli - Amazon AWS command line interface

• basemount - an Illumina tool to mount BaseSpace Sequence Hub data.

• bbcp - a point-to-point network file copy application from NERSC

• lftp - can transfer files via FTP, FTPS, HTTP, HTTPS, FISH, SFTP, BitTorrent, and FTP over HTTP proxy.

• gcloud - Google Cloud command line interface, including the gsutil command

• NBIA Data Retriever - a tool for downloading data from the TCIA Data Portal , installed under /opt/NBIADataRetriever

• rclone - rsync for cloud storage

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