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As part of Harvard Medical School's response to COVID-19, HMS Research Computing is now working remotely. All training classes will be held online until further notice, via Zoom meetings. |
Registrations are now managed through the Harvard Training Portal, which requires a Harvard ID (HUID). Those members of the extensive HMS community who do not currently have HUIDs - such as employees at affiliate hospitals, or collaborators from other institutions - may self-register for one as a "Person of Interest" with their faculty member's sponsorship. This form may take several days to process, please visit this page for details: https://it.hms.harvard.edu/our-services/accounts-and-user-access/person-interest-poi
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Class | Date | Time | Location | Seats | Training Materials | Registration (Only click here to register!) |
Intro to O2 | Wednesday, February 16, 2022 | 3-5pm | Virtual | 35 | ||
Intro to R/Bioconductor | Wednesday, February 23, 2022 | 3-5pm | Virtual | 35 | ||
Intro to Python | Wednesday, March 2, 2022 | 3-5pm | Virtual | 35 | ||
Intro to Parallel Computing | Wednesday, March 9, 2022 | 3-5pm | Virtual | 50 | ||
Intermediate O2 | Wednesday, March 16, 2022 | 3-5pm | Virtual | 35 | ||
Intro to Matlab | Wednesday, March 23, 2022 | 3-5pm | Virtual | 50 | ||
Optimizing O2 Jobs | Wednesday, March 30, 2022 | 3-4pm | Virtual | 50 | ||
Intro to O2 | Wednesday, April 6, 2022 | 3-5pm | Virtual | 35 | ||
Intro to Python | Wednesday, April 13, 2022 | 3-5pm | Virtual | 35 | ||
Intro to R/Bioconductor | Wednesday, April 20, 2022 | 3-5pm | Virtual | 35 | ||
Intro to Git/Github | Wednesday, April 27, 2022 | 3-4pm | Virtual | 35 | ||
BioGrids Academic Software Platform: No Installation Required | Wednesday, May 4, 2022 | 3-4pm | Virtual | 35 | ||
Intro to RCBio | Wednesday, May 11, 2022 | 3-5pm | Virtual | 35 | ||
Intro to Python | Wednesday, May 18, 2022 | 3-5pm | Virtual | 35 |
Optimizing O2 Jobs
Description:
In this short seminar we cover some simple but essential rules to use the O2 cluster in the most efficient (and inexpensive ) way.
Audience:
Anyone running jobs in the O2 cluster
Prerequisites:
Familiarity with the O2 cluster and the Slurm scheduler.
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This is a short introduction to Parallel Computing that will include an overview of the basic concepts of parallel programming: from running your job in an embarrassingly parallel way to writing simple shared and distributed memory parallelization codes in different languages. The seminar will cover several examples of actual parallel codes however it will not have any "hands on" components. A basic programming experience (of any language, no parallelization) is preferred in order to better follow the topics presented during the seminar.
Intermediate O2
Intermediate O2 is for current O2 users who would like to brush up on their bash skills, learn more advanced file transfer techniques, and unleash some of the powerful features of the SLURM scheduler.
Intro to Git and GitHub
This course introduces Git and GitHub and covers topics including: Getting Started with Git for version control, Using GitHub Desktop effectively, Collaborating with others on GitHub, and Utilizing GitHub Flow for better workflow. No previous exposure is assumed. We hope attendees will leave the class with the knowledge and tools necessary to start integrating Git into their workflows and excited to begin collaborating on GitHub.
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