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If you need additional help you can reach out to rchelp@hms.harvard.edu, make sure to include the full path listed on the OOD file page along with any content printed in the output.log file.
Create a virtual environment
Visithttps://harvardmed.atlassian.net/wiki/x/AoQGXwfor full details.
First, start an interactive job on O2:
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srun -t 30:00 --pty -p interactive -c 1 --mem=8G /bin/bash |
Create virtual environment with Jupyter and
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module purge module load gcc/9.2.0 python/3.9.14 virtualenv /home/$USER/jupyterenv source /home/$USER/jupyterenv/bin/activate pip3 install jupyter jupyterlab pip3 install --force-reinstall urllib3==1.26.16 |