RC 1.2 (drafts)
Run Bash Script As Slurm Pipeline through rcbio/1.2
Get more informative slurm email notification and logs through rcbio/1.2
skewer, FastQC, Hisat2 and HtseqCount through rcbio/1.2
RC 1.1
Run Bash Script As Slurm Pipeline through rcbio/1.1
skewer, FastQC, Hisat2 and HtseqCount through rcbio/1.1
skewer, FastQC, Hisat2, Stringtie and Ballgown through rcbio/1.1
Kallisto And Sleuth For RNASeq through rcbio/1.1
rsem-1.3.0 with bowtie-2.2.9
HTSeq through module rcbio/1.1
bowtie2 through module rcbio/1.1
bwa through module rcbio/1.1
STAR through module rcbio/1.1
Build Folder Structures From Sample Sheet for rcbio NGS Workflows
Fastx, Bowtie2 and MACS2 for ChipSeq (testing phase)
spp (1.15.2) for ChipSeq
Juicer
RC 1.0
Run Bash Script As Slurm Pipeline through rcbio/1.0