Shared Containers on O2
This page provide brief information of containers available to all O2 users.
List of Containers
- 1 MaxQuant
MaxQuant
A quantitative proteomics software package designed for analyzing large mass-spectrometric data sets.
# Connect to O2
# Note: replace "PORT" by a random number in the 50000-range, e.g. 50021
ssh -Y -L PORT:127.0.0.1:PORT <your_hms_id>@o2.hms.harvard.edu
# start an interactive job (e.g., requesting 1 hour, 4 threads, and 10GB)
# Note: Replace "PORT" with the choosed number in the above step
srun -t 0-1 --x11 --pty -p interactive -c 4 --mem=10G --tunnel PORT:PORT /bin/bash