Shared Containers on O2

Owned by Gaby Rodriguez
Last updated: Jul 26, 2024
1 min read

This page provide brief information of containers available to all O2 users.

List of Containers

MaxQuant

A quantitative proteomics software package designed for analyzing large mass-spectrometric data sets.

# Connect to O2 # Note: replace "PORT" by a random number in the 50000-range, e.g. 50021 ssh -Y -L PORT:127.0.0.1:PORT <your_hms_id>@o2.hms.harvard.edu # start an interactive job (e.g., requesting 1 hour, 4 threads, and 10GB) # Note: Replace "PORT" with the choosed number in the above step srun -t 0-1 --x11 --pty -p interactive -c 4 --mem=10G --tunnel PORT:PORT /bin/bash