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As part of Harvard Medical School's response to COVID-19, HMS Research Computing is now working remotely. All training classes will be held online until further notice, via Zoom meetings. |
Registrations are now managed through the Harvard Training Portal, which requires a Harvard ID (HUID). Those members of the extensive HMS community who do not currently have HUIDs - such as employees at affiliate hospitals, or collaborators from other institutions - may self-register for one as a "Person of Interest" with their faculty member's sponsorship. This form may take several days to process, and is available here:
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Class | Date | Time | Location | Seats | Training Materials | Registration (Only click here to register!) |
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BioGrids Academic Software Platform: No Installation Required | Wednesday, September 8, 2021 | 4-5pm | Virtual | 35 | register | |
Intro to O2 | Wednesday, September 15, 2021 | 3-5pm | Virtual | 35 | ||
Intro to Matlab | Wednesday, September 22, 2021 | 3-5pm | Virtual | 50 | ||
RCBio: easy and quick HPC pipeline builder & runner | Wednesday, September 29, 2021 | 3-5pm | Virtual | 35 | register | |
Intro to Parallel Computing | Wednesday, October 6, 2021 | 3-5pm | Virtual | 50 | ||
Intro to Python | Wednesday, October 13, 2021 | 3-5pm | Virtual | 35 | ||
Intro to O2 | Wednesday, October 20, 2021 | 3-5pm | Virtual | 35 | ||
Intro to R/Bioconductor | Wednesday, October 27, 2021 | 3-5pm | Virtual | 35 | ||
Intro to Git/Github | Wednesday, November 3, 2021 | 3-5pm | Virtual | 30 | ||
Intro to Python | Wednesday, November 10, 2021 | 3-5pm | Virtual | 35 | ||
Intermediate O2 | Wednesday, November 17, 2021 | 3-5pm | Virtual | 35 | ||
No class | Wednesday, November 24, 2021 | |||||
Intro to R/Bioconductor | Wednesday, December 1, 2021 | 3-5pm | Virtual | 35 | ||
Introduction to Globus Data Transfer and Data Collaboration on O2 | Wednesday, December 8, 2021 | 3-5pm | Virtual | 35 |
RCBio: easy and quick HPC pipeline builder & runner
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This is a short introduction to Parallel Computing that will include an overview of the basic concepts of parallel programming: from running your job in an embarrassingly parallel way to writing simple shared and distributed memory parallelization codes in different languages. The seminar will cover several examples of actual parallel codes however it will not have any "hands on" components. A basic programming experience (of any language, no parallelization) is preferred in order to better follow the topics presented during the seminar.
Intermediate O2
Intermediate O2 is for current O2 users who would like to brush up on their bash skills, learn more advanced file transfer techniques, and unleash some of the powerful features of the SLURM scheduler.
Intro to Git and GitHub
This course introduces Git and GitHub and covers topics including: Getting Started with Git for version control, Using GitHub Desktop effectively, Collaborating with others on GitHub, and Utilizing GitHub Flow for better workflow. No previous exposure is assumed. We hope attendees will leave the class with the knowledge and tools necessary to start integrating Git into their workflows and excited to begin collaborating on GitHub.
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