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/n/shared_db
We started using /n/shared_db for public databases with the launch of the O2 cluster. The databases are organized in this folder structure:
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We have create a text file containing all the database names and paths. You can directly search the species and software:
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$ grep -i bowtie2 /n/shared_db/allDatabases.no.bcbio.singularity.rcbio.txt | grep -i hg19 | less |
You should see (uk means unknown here):
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