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From July 1st 2021 the gpu_requeue partition is available only to users working for a PI with a primary or secondary appointment in a pre-clinical department. |
The O2 cluster includes a set of lab-contributed GPU nodes. These nodes were purchased by individual labs, but are made available to the rest of the O2 community within the re-queue GPU partition called gpu_requeue.
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How to Submit to the gpu_requeue Partition
To submit jobs on gpu_requeue you need to specify that partition with the flag "-p", and add the flag --requeue. Without the requeue flags jobs will still get killed but will not be automatically requeued.
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How to Efficiently Use the gpu_requeue Partition
IMPORTANT:
In order to work properly, any job submitted to gpu_requeue that writes intermediate files must either be restartable from the beginning (overwriting partially completed files) or from a last saved checkpoint. Researchers are responsible to choose jobs that can be run in this way.
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