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| Code Block |
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module load gcc/6.2.0 python/2.7.12 rcbio/1.1
cp /n/app/rcbio/1.1/bin/htseq.sh .
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note: rcbio/1.1 is not available yet. If you would like to try the version still in development stage, you can run:
export PATH=/home/ld32/rcbioDev/bin:$PATH
cp /home/ld32/rcbioDev/bin/htseq*.sh . |
Now you can modify the options as needed. For example, if your file are huge, you may need increase mem and runtime -t for sbatch command.
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