Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Create a working directory on scratch and change into the newly-created directory. For example, for user abc123, the working directory will be

Code Block
mkdir /n/scratch3scratch/users/a/abc123/rsem
cd  /n/scratch3scratch/users/a/abc123/rsem

Load modules and setup path, then copy some test data. For details to use your own data, please visit this page: Build Folder Structures From Sample Sheet for rcbio NGS Workflows

...