changes.mady.by.user lingsheng_dong
Saved on Jul 07, 2021
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Run Bash Script As Slurm Pipeline through rcbio/1.2
Get more informative slurm email notification and logs through rcbio/1.2
skewer, FastQC, Hisat2 and HtseqCount through rcbio/1.2
Build Folder Structures From Sample Sheet for rcbio NGS Workflows using rcbio/1.2
RC 1.1
Run Bash Script As Slurm Pipeline through rcbio/1.1
skewer, FastQC, Hisat2 and HtseqCount through rcbio/1.1
skewer, FastQC, Hisat2, Stringtie and Ballgown through rcbio/1.1
Kallisto And Sleuth For RNASeq through rcbio/1.1
rsem-1.3.0 with bowtie-2.2.9
HTSeq through module rcbio/1.1
bowtie2 through module rcbio/1.1
bwa through module rcbio/1.1
STAR through module rcbio/1.1
Build Folder Structures From Sample Sheet for rcbio NGS Workflows
Fastx, Bowtie2 and MACS2 for ChipSeq (testing phase)
spp (1.15.2) for ChipSeq
Juicer