Intro to R & Bioconductor

Class Material

ssh -Y -L $PORT:127.0.0.1:$PORT <your_HMS_ID>@o2.hms.harvard.edu

Create an R Personal Library

# Create a library on your HOME ("~") directory
mkdir ~/R-4.1.1
# Create an .Renviron file
echo 'R_LIBS_USER="~/R-4.1.1"'> $HOME/.Renviron

For more in-depth details, please visit our wiki page - RStudio on O2.

Load RStudio modules

module load rstudio_launcher/1.0
module load gcc/6.2.0
module load R/4.1.1
module load git/2.9.5

Launch RStudio

Comprehensive R Archive Network (CRAN)

Bioconductor

GitHub